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1

A conformational checkpoint between DNA binding and cleavage by CRISPR-Cas9

Dagdas, Yavuz S., Chen, Janice S., Sternberg, Samuel H., Doudna, Jennifer A., Yildiz, Ahmet

Journal:

Science Advances

Year:

2017

Language:

english

File:

PDF, 2.34 MB

english, 2017

2

Parental Divorce and Children From Diverse Backgrounds: Multidisciplinary Perspectives on Mental Health, Parent–Child Relationships, and Educational Experiences

Demir-Dagdas, Tuba, Isik-Ercan, Zeynep, Intepe-Tingir, Seyma, Cava-Tadik, Yasemin

Journal:

Journal of Divorce & Remarriage

Year:

2017

Language:

english

File:

PDF, 1.33 MB

english, 2017

3

Thermodynamic analysis of an existing coal-fired power plant for district heating/cooling application

Hasan Huseyin Erdem, Ahmet Dagdas, Suleyman Hakan Sevilgen, Burhanettin Cetin, Ali Volkan Akkaya, Bahri Sahin, Ismail Teke, Cengiz Gungor, Selcuk Atas

Journal:

Applied Thermal Engineering

Year:

2010

Language:

english

File:

PDF, 807 KB

english, 2010

4

Enhanced proofreading governs CRISPR–Cas9 targeting accuracy

Chen, Janice S., Dagdas, Yavuz S., Kleinstiver, Benjamin P., Welch, Moira M., Sousa, Alexander A., Harrington, Lucas B., Sternberg, Samuel H., Joung, J. Keith, Yildiz, Ahmet, Doudna, Jennifer A.

Journal:

Year:

2017

Language:

english

File:

PDF, 11.45 MB

english, 2017

5

Comparative energetic and exergetic performance analyses for coal-fired thermal power plants in Turkey

Hasan Huseyin Erdem, Ali Volkan Akkaya, Burhanettin Cetin, Ahmet Dagdas, Suleyman Hakan Sevilgen, Bahri Sahin, Ismail Teke, Cengiz Gungor, Selcuk Atas

Journal:

International Journal of Thermal Sciences

Year:

2009

Language:

english

File:

PDF, 282 KB

english, 2009

6

Enhanced Proofreading Governs CRISPR-Cas9 Targeting Accuracy

Chen, Janice S., Dagdas, Yavuz S., Kleinstiver, Benjamin P., Welch, Moira M., Sousa, Alexander A., Harrington, Lucas B., Sternberg, Samuel H., Joung, Keith J., Yildiz, Ahmet, Doudna, Jennifer A.

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 44 KB

english, 2018

7

Coagulopathy parameters in patients with Crimean-Congo hemorrhagic fever and its relation with mortality

P. Onguru, S. Dagdas, H. Bodur, M. Yilmaz, E. Akinci, S. Eren, G. Ozet

Journal:

Journal of Clinical Laboratory Analysis

Year:

2010

Language:

english

File:

PDF, 86 KB

english, 2010

8

Mitochondrial kinases in Parkinson’s disease: Converging insights from neurotoxin and genetic models

Ruben K. Dagda, Jianhui Zhu, Charleen T. Chu

Journal:

Year:

2009

Language:

english

File:

PDF, 358 KB

english, 2009

9

ERK-mediated phosphorylation of TFAM downregulates mitochondrial transcription: Implications for Parkinson's disease

Wang, Kent Z.Q., Zhu, Jianhui, Dagda, Ruben K., Uechi, Guy, Cherra, Salvatore J., Gusdon, Aaron M., Balasubramani, Manimalha, Chu, Charleen T.

Journal:

Year:

2014

Language:

english

File:

PDF, 2.38 MB

english, 2014

10

Performance Analysis and Optimization of Double-Flash Geothermal Power Plants

Journal:

Journal of Energy Resources Technology

Year:

2007

Language:

english

File:

PDF, 385 KB

english, 2007

11

Monomethylarsonous acid, but not inorganic arsenic, is a mitochondria-specific toxicant in vascular smooth muscle cells

Pace, Clare, Banerjee, Tania Das, Welch, Barrett, Khalili, Roxana, Dagda, Ruben K., Angermann, Jeff

Journal:

Toxicology in Vitro

Year:

2016

Language:

english

File:

PDF, 1.60 MB

english, 2016

12

Effect Of 12-week Modified Tai Chi Exercise On Bone Metabolism In Hemodialysis Patients

Shen, Chwan-Li, Phisitkul, Sorot, Chyu, Ming-Chien, Zhang, Yan, Do, Thong, Dagda, Raul Y., Camp, Callie, Dagda, Marisela, Prabhakar, Sharma

Journal:

Medicine & Science in Sports & Exercise

Year:

2010

Language:

english

File:

PDF, 53 KB

english, 2010

13

What should be the laboratory approach against isolated prolongation of a activated partial thromboplastin time?

Falay, Mesude, Senes, Mehmet, Yücel, Dogan, Turhan, Turan, Dagdaş, Simten, Pekin, Melike, Nazaroglu, Namik K., Özet, Gülsüm

Journal:

Journal of Clinical Laboratory Analysis

Year:

2018

Language:

english

File:

PDF, 355 KB

english, 2018

14

Nutritional Modulation of the Intestinal Microbiota; Future Opportunities for the Prevention and Treatment of Neuroimmune and Neuroinflammatory Disease

Lombardi, Vincent C., De Meirleir, Kenny L., Subramanian, Krishnamurthy, Nourani, Sam M., Dagda, Ruben K., Delaney, Shannon L., Palotás, András

Journal:

The Journal of Nutritional Biochemistry

Year:

2018

Language:

english

File:

PDF, 1.66 MB

english, 2018

15

Naja naja oxiana Cobra Venom Cytotoxins CTI and CTII Disrupt Mitochondrial Membrane Integrity: Implications for Basic Three-Fingered Cytotoxins

Gasanov, Sardar E., Shrivastava, Indira H., Israilov, Firuz S., Kim, Aleksandr A., Rylova, Kamila A., Zhang, Boris, Dagda, Ruben K., van der Wel, Patrick

Journal:

Year:

2015

Language:

english

File:

PDF, 7.06 MB

english, 2015

16

How AMPK and PKA Interplay to Regulate Mitochondrial Function and Survival in Models of Ischemia and Diabetes

Zhang, Jingdian, Wang, Yumeng, Liu, Xiaofeng, Dagda, Ruben K., Zhang, Ying

Journal:

Oxidative Medicine & Cellular Longevity

Year:

2017

Language:

english

File:

PDF, 1.84 MB

english, 2017

17

Antioxidants Protect against Arsenic Induced Mitochondrial Cardio-Toxicity

Pace, Clare, Dagda, Ruben, Angermann, Jeff

Journal:

Year:

2017

Language:

english

File:

PDF, 1.18 MB

english, 2017

18

Role of Mitochondrial Dysfunction in Degenerative Brain Diseases, an Overview

Journal:

Year:

2018

Language:

english

File:

PDF, 175 KB

english, 2018

19

In planta determination of GaMyb transcription factor as a target of pathogen induced microRNA, mir159

Mahinur S Akkaya, Gulay Gok Dagdas, Yasin F Dagdas

Journal:

Current Opinion in Biotechnology

Year:

2011

Language:

english

File:

PDF, 84 KB

english, 2011

20

Protective actions of green tea polyphenols and alfacalcidol on bone microstructure in female rats with chronic inflammation

Chwan-Li Shen, James K. Yeh, Christina Samathanam, Jay J. Cao, Barbara J. Stoecker, Raul Y. Dagda, Ming-Chien Chyu, Jia-Sheng Wang

Journal:

The Journal of Nutritional Biochemistry

Year:

2011

Language:

english

File:

PDF, 1.14 MB

english, 2011

21

Expression and function of pro-inflammatory interleukin IL-17 and IL-17 receptor in normal, benign hyperplastic, and malignant prostate

Georg E. Steiner, Martin E. Newman, Doris Paikl, Ursula Stix, Nima Memaran-Dagda, Chung Lee, Michael J. Marberger

Journal:

Year:

2003

Language:

english

File:

PDF, 410 KB

english, 2003

22

Synergistic effects of green tea polyphenols and alphacalcidol on chronic inflammation-induced bone loss in female rats

C.-L. Shen, J. K. Yeh, J. J. Cao, O. L. Tatum, R. Y. Dagda, J.-S. Wang

Journal:

Osteoporosis International

Year:

2010

Language:

english

File:

PDF, 253 KB

english, 2010

23

Green tea polyphenols attenuate deterioration of bone microarchitecture in female rats with systemic chronic inflammation

C.-L. Shen, J. K. Yeh, C. Samathanam, J. J. Cao, B. J. Stoecker, R. Y. Dagda, M.-C. Chyu, D. M. Dunn, J.-S. Wang

Journal:

Osteoporosis International

Year:

2011

Language:

english

File:

PDF, 356 KB

english, 2011

24

Supplementation with Green Tea Polyphenols Improves Bone Microstructure and Quality in Aged, Orchidectomized Rats

Chwan-Li Shen, Jay J. Cao, Raul Y. Dagda, Thomas E. Tenner, Ming-Chien Chyu, James K. Yeh

Journal:

Calcified Tissue International

Year:

2011

Language:

english

File:

PDF, 324 KB

english, 2011

25

Mitochondrial quality control: insights on how Parkinson’s disease related genes PINK1, parkin, and Omi/HtrA2 interact to maintain mitochondrial homeostasis

Ruben K. Dagda, Charleen T. Chu

Journal:

Journal of Bioenergetics and Biomembranes

Year:

2009

Language:

english

File:

PDF, 211 KB

english, 2009

26

Risk factors for thrombophilia in young adults presenting with thrombosis

Osman Yokus, Murat Albayrak, Ozlem Sahin Balcik, Funda Ceran, Simten Dagdas, Mesude Yilmaz, Gulsum Ozet

Journal:

International Journal of Hematology

Year:

2009

Language:

english

File:

PDF, 169 KB

english, 2009

27

Green tea polyphenols mitigate bone loss of female rats in a chronic inflammation-induced bone loss model

Chwan-Li Shen, James K. Yeh, Jay J. Cao, Owatha L. Tatum, Raul Y. Dagda, Jia-Sheng Wang

Journal:

The Journal of Nutritional Biochemistry

Year:

2010

Language:

english

File:

PDF, 437 KB

english, 2010

28

Heat exchanger optimization for geothermal district heating systems: A fuel saving approach

Journal:

Renewable Energy

Year:

2007

Language:

english

File:

PDF, 174 KB

english, 2007

29

The relation between plasminogen activator inhibitor activity and disease activation in acute myeloblastic leukaemia patients

M. YILMAZ, S. DAGDAS, S. Z. AKI, N. GULER, A. G. AKOZ, Z. ERDIN, G. ALANOGLU, G. OZET

Journal:

International Journal of Laboratory Hematology (Blackwell)

Year:

2006

Language:

english

File:

PDF, 57 KB

english, 2006

30

Review: Autophagy and neurodegeneration: survival at a cost?

S. J. Cherra III, R. K. Dagda, C. T. Chu

Journal:

Neuropathology and Applied Neurobiology

Year:

2010

Language:

english

File:

PDF, 255 KB

english, 2010

31

Septin-Mediated Plant Cell Invasion by the Rice Blast Fungus, Magnaporthe oryzae

Dagdas, Y. F., Yoshino, K., Dagdas, G., Ryder, L. S., Bielska, E., Steinberg, G., Talbot, N. J.

Journal:

Year:

2012

Language:

english

File:

PDF, 9.88 MB

english, 2012

32

Thermodynamic evaluation of Denizli Kızıldere geothermal power plant and its performance improvement

Ahmet Daǧdaş, Recep Öztürk, Şükrü Bekdemir

Journal:

Energy Conversion and Management

Year:

2005

Language:

english

File:

PDF, 356 KB

english, 2005

33

A new ZTL-type F-box functions as a positive regulator in disease resistance: VIGS analysis in barley against powdery mildew

Yasin Fatih Dagdas, Gulay Dagdas, Turgay Unver, Mahinur S. Akkaya

Journal:

Physiological and Molecular Plant Pathology

Year:

2009

Language:

english

File:

PDF, 556 KB

english, 2009

34

Mojave rattlesnakes (Crotalus scutulatus scutulatus) lacking the acidic subunit DNA sequence lack Mojave toxin in their venom

B.J. Wooldridge, G. Pineda, J.J. Banuelas-Ornelas, R.K. Dagda, S.E. Gasanov, E.D. Rael, C.S. Lieb

Journal:

Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology

Year:

2001

Language:

english

File:

PDF, 620 KB

english, 2001

35

Green tea polyphenols benefits body composition and improves bone quality in long-term high-fat diet–induced obese rats

Chwan-Li Shen, Jay J. Cao, Raul Y. Dagda, Samuel Chanjaplammootil, Chuanwen Lu, Ming-Chien Chyu, Weimin Gao, Jia-Sheng Wang, James K. Yeh

Journal:

Nutrition Research

Year:

2012

Language:

english

File:

PDF, 375 KB

english, 2012

36

P-67 THERAPEUTIC PLASMA EXCHANGE IN PATIENTS WITH NEUROLOGIC DISEASES: A SINGLE CENTER EXPERIENCE

C. Sunu, O. Onder Savas, G. Ozet, F. Ceran, S. Dagdas, M. Falay, G. Tokgoz, Berna Afacan Ozturk, A. Gonderen

Journal:

Transfusion and Apheresis Science

Year:

2012

Language:

english

File:

PDF, 59 KB

english, 2012

37

P-68 STEM CELL MOBILIZATION WITH PLERIXAFOR: A SINGLE CENTER EXPERIENCE

C. Sunu, O. Onder Savas, G. Ozet, S. Dagdas, F. Ceran, M. Falay, N. Koyuncu

Journal:

Transfusion and Apheresis Science

Year:

2012

Language:

english

File:

PDF, 49 KB

english, 2012

38

Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells

Chu, Charleen T., Ji, Jing, Dagda, Ruben K., Jiang, Jian Fei, Tyurina, Yulia Y., Kapralov, Alexandr A., Tyurin, Vladimir A., Yanamala, Naveena, Shrivastava, Indira H., Mohammadyani, Dariush, Qiang Wan

Journal:

Nature Cell Biology

Year:

2013

Language:

english

File:

PDF, 3.10 MB

english, 2013

39

Nitrite activates protein kinase A in normoxia to mediate mitochondrial fusion and tolerance to ischaemia/reperfusion

Pride, C. K., Mo, L., Quesnelle, K., Dagda, R. K., Murillo, D., Geary, L., Corey, C., Portella, R., Zharikov, S., St Croix, C., Maniar, S., Chu, C. T., K. H. Khoo, N., Shiva, S.

Journal:

Cardiovascular Research

Year:

2014

Language:

english

File:

PDF, 1.23 MB

english, 2014

40

Molecular models of the Mojave rattlesnake (Crotalus scutulatus scutulatus) venom metalloproteinases reveal a structural basis for differences in hemorrhagic activities

Dagda, Ruben K., Gasanov, Sardar E., Zhang, Boris, Welch, William, Rael, Eppie D.

Journal:

Journal of Biological Physics

Year:

2014

Language:

english

File:

PDF, 7.48 MB

english, 2014

41

NADPH oxidases regulate septin-mediated cytoskeletal remodeling during plant infection by the rice blast fungus

Ryder, L. S., Dagdas, Y. F., Mentlak, T. A., Kershaw, M. J., Thornton, C. R., Schuster, M., Chen, J., Wang, Z., Talbot, N. J.

Journal:

Proceedings of the National Academy of Sciences

Year:

2013

Language:

english

File:

PDF, 759 KB

english, 2013

42

Nitrite Activates Protein Kinase A in Normoxia to Increase Mitochondrial Fusion and Confer Delayed Cytoprotection After Ischemia/Reperfusion

Kamga, Christelle, Mo, Li, Murillo, Daniel, Geary, Lisa, Zharikov, Sergey, Adams, Madison, Corey, Catherine, Croix, Claudette St., Maniar, Salony, Beer-Stolz, Donna, Dagda, Ruben, Chu, Charleen, Khoo,

Journal:

Free Radical Biology and Medicine

Year:

2012

Language:

english

File:

PDF, 195 KB

english, 2012

43

Mitochondrial Dysfunction Accompanied by ERK-Dependent Phosphorylation of TFAM in a Chronic MPP+ Model

Wang, Kent Z., Zhu, Jianhui, Dagda, Ruben, Uechi, Guy, Cherra, Salvatore J., Balasubramani, Manimalha, Chu, Charleen T.

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 41 KB

english, 2013

44

Functional Roles of Distinct Subcellular Pools of PTEN Induced Kinase-1 on Oxidative Stress and Mitochondrial Function

Dagda, Ruben K, Gusdon, Aaron, Chu, Charleen T

Journal:

Free Radical Biology and Medicine

Year:

2013

Language:

english

File:

PDF, 74 KB

english, 2013

45

Bioactive self-assembled peptide nanofibers for corneal stroma regeneration

Uzunalli, G., Soran, Z., Erkal, T.S., Dagdas, Y.S., Dinc, E., Hondur, A.M., Bilgihan, K., Aydin, B., Guler, M.O., Tekinay, A.B.

Journal:

Acta Biomaterialia

Year:

2014

Language:

english

File:

PDF, 3.75 MB

english, 2014

46

P43

Kamga, Christelle, Mo, Li, Dagda, Ruben K., Geary, Lisa, Corey, Catherine, Zharikov, Sergey, St Croix, Claudette, Beer-Stolz, Donna, Khoo, Nicholas, Shiva, Sruti

Journal:

Year:

2013

Language:

english

File:

PDF, 37 KB

english, 2013

47

Erratum to: Molecular models of the Mojave rattlesnake (Crotalus scutulatus scutulatus) venom metalloproteinases reveal a structural basis for differences in hemorrhagic activities

Dagda, Ruben K., Gasanov, Sardar E., Zhang, Boris, Welch, William, Rael, Eppie D.

Journal:

Journal of Biological Physics

Year:

2014

Language:

english

File:

PDF, 530 KB

english, 2014

48

Beyond the mitochondrion: cytosolic PINK1 remodels dendrites through Protein Kinase A

Dagda, Ruben K., Pien, Irene, Wang, Ruth, Zhu, Jianhui, Wang, Kent Z. Q., Callio, Jason, Banerjee, Tania Das, Dagda, Raul Y., Chu, Charleen T.

Journal:

Journal of Neurochemistry

Year:

2014

Language:

english

File:

PDF, 1.21 MB

english, 2014

49

Interfiber interactions alter the stiffness of gels formed by supramolecular self-assembled nanofibers

Dagdas, Yavuz S., Tombuloglu, Aysegul, Tekinay, Ayse B., Dana, Aykutlu, Guler, Mustafa O.

Journal:

Year:

2011

Language:

english

File:

PDF, 472 KB

english, 2011

50

Bilateral proptosis as the initial presentation of systemic nodular lymphocyte predominant Hodgkin lymphoma

Akoz, Ayla Gokmen, Dagdas, Simten, Soysal, Hulya, Ozet, Gulsum, Ustun, Huseyin

Journal:

Leukemia and Lymphoma

Year:

2007

Language:

english

File:

PDF, 943 KB

english, 2007

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